Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.88■□□□□ 0.29
CPNE6O95741 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.88■□□□□ 0.29
CPNE6O95741 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CPNE6O95741 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE6O95741 IGHV3-52-201ENST00000519770 353 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 AC002347.1-201ENST00000569543 541 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 AC109462.3-201ENST00000573934 613 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.88■□□□□ 0.29
CPNE6O95741 AC010327.4-202ENST00000591484 748 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 AC019129.2-201ENST00000609837 1235 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE6O95741 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE6O95741 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE6O95741 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE6O95741 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 AC006116.8-202ENST00000587620 1550 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CPNE6O95741 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 RPSAP43-201ENST00000402237 625 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 AC004832.2-201ENST00000426397 482 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 GPX1P2-201ENST00000429271 606 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 AC064836.3-201ENST00000607928 673 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 AL691403.2-201ENST00000618460 490 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 AC100803.2-201ENST00000562459 1963 ntBASIC16.87■□□□□ 0.29
CPNE6O95741 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.87■□□□□ 0.29
CPNE6O95741 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE6O95741 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CPNE6O95741 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE6O95741 AC009949.1-201ENST00000623048 1830 ntBASIC16.86■□□□□ 0.29
CPNE6O95741 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.86■□□□□ 0.29
CPNE6O95741 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 ELK2BP-201ENST00000415014 1224 ntBASIC16.86■□□□□ 0.29
CPNE6O95741 AC092183.1-201ENST00000469884 875 ntBASIC16.86■□□□□ 0.29
CPNE6O95741 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.86■□□□□ 0.29
CPNE6O95741 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms