Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
SIX6O95475 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.41□□□□□ -0.1
SIX6O95475 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX6O95475 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SIX6O95475 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 AC239809.2-201ENST00000415381 517 ntBASIC14.4□□□□□ -0.1
SIX6O95475 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.4□□□□□ -0.1
SIX6O95475 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 AC233263.1-201ENST00000578059 224 ntBASIC14.4□□□□□ -0.1
SIX6O95475 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.4□□□□□ -0.1
SIX6O95475 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.4□□□□□ -0.1
SIX6O95475 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.4□□□□□ -0.1
SIX6O95475 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX6O95475 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX6O95475 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX6O95475 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SIX6O95475 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX6O95475 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX6O95475 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms