Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 RPL28-206ENST00000558752 671 ntTSL 3 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 BNIP3P29-201ENST00000598302 571 ntBASIC25.36■■□□□ 1.65
RAPGEF3O95398 AC011447.5-201ENST00000616168 564 ntBASIC25.36■■□□□ 1.65
RAPGEF3O95398 MIR6787-201ENST00000616675 61 ntBASIC25.36■■□□□ 1.65
RAPGEF3O95398 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RAPGEF3O95398 AL109936.8-201ENST00000641772 604 ntBASIC25.36■■□□□ 1.65
RAPGEF3O95398 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF3O95398 LINC00896-202ENST00000609602 2128 ntBASIC25.36■■□□□ 1.65
RAPGEF3O95398 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF3O95398 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF3O95398 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 ANKRD19P-201ENST00000338192 862 ntBASIC25.35■■□□□ 1.65
RAPGEF3O95398 RPL28-204ENST00000431533 590 ntTSL 2 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF3O95398 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF3O95398 AP005482.1-201ENST00000563722 1273 ntBASIC25.35■■□□□ 1.65
RAPGEF3O95398 CTBP2P3-201ENST00000585629 1255 ntBASIC25.35■■□□□ 1.65
RAPGEF3O95398 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF3O95398 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC25.35■■□□□ 1.65
RAPGEF3O95398 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF3O95398 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF3O95398 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF3O95398 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF3O95398 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 NME6-203ENST00000415644 849 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF3O95398 AL079307.3-201ENST00000556114 283 ntBASIC25.34■■□□□ 1.65
RAPGEF3O95398 ORC6-206ENST00000568364 888 ntTSL 5 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF3O95398 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC25.34■■□□□ 1.65
RAPGEF3O95398 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF3O95398 LINC00895-201ENST00000629028 1637 ntBASIC25.34■■□□□ 1.65
RAPGEF3O95398 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 TOP3BP1-201ENST00000420768 1380 ntBASIC25.33■■□□□ 1.65
RAPGEF3O95398 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AL512361.1-201ENST00000554200 418 ntBASIC25.33■■□□□ 1.65
RAPGEF3O95398 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AC105021.1-202ENST00000570572 669 ntBASIC25.33■■□□□ 1.65
RAPGEF3O95398 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RAPGEF3O95398 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF3O95398 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RAPGEF3O95398 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC25.33■■□□□ 1.64
RAPGEF3O95398 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 AC044860.1-202ENST00000559481 777 ntBASIC25.32■■□□□ 1.64
RAPGEF3O95398 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 AC133552.6-201ENST00000613406 534 ntBASIC25.32■■□□□ 1.64
RAPGEF3O95398 AC068587.10-201ENST00000641210 219 ntBASIC25.32■■□□□ 1.64
RAPGEF3O95398 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF3O95398 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
RAPGEF3O95398 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
RAPGEF3O95398 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms