Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL5O76039 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL5O76039 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL5O76039 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDKL5O76039 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL5O76039 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL5O76039 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDKL5O76039 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDKL5O76039 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL5O76039 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
CDKL5O76039 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 AC009053.2-201ENST00000563701 2365 ntBASIC19.95■□□□□ 0.78
CDKL5O76039 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDKL5O76039 AC092068.3-201ENST00000587894 2016 ntBASIC19.95■□□□□ 0.78
CDKL5O76039 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL5O76039 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDKL5O76039 AC139887.3-201ENST00000568585 713 ntBASIC19.95■□□□□ 0.78
CDKL5O76039 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.95■□□□□ 0.78
CDKL5O76039 MTDHP4-201ENST00000600287 670 ntBASIC19.95■□□□□ 0.78
CDKL5O76039 AC064862.7-201ENST00000604520 867 ntBASIC19.95■□□□□ 0.78
CDKL5O76039 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL5O76039 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL5O76039 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL5O76039 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL5O76039 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.94■□□□□ 0.78
CDKL5O76039 AC105020.1-201ENST00000435356 2205 ntBASIC19.94■□□□□ 0.78
CDKL5O76039 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDKL5O76039 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.94■□□□□ 0.78
CDKL5O76039 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.94■□□□□ 0.78
CDKL5O76039 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 AL139424.1-201ENST00000607572 797 ntBASIC19.94■□□□□ 0.78
CDKL5O76039 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDKL5O76039 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDKL5O76039 AL590787.1-201ENST00000568856 1315 ntBASIC19.94■□□□□ 0.78
CDKL5O76039 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.94■□□□□ 0.78
CDKL5O76039 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.94■□□□□ 0.78
CDKL5O76039 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL5O76039 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.94■□□□□ 0.78
CDKL5O76039 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CDKL5O76039 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDKL5O76039 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL5O76039 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.93■□□□□ 0.78
CDKL5O76039 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CDKL5O76039 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL5O76039 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDKL5O76039 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDKL5O76039 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL5O76039 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.93■□□□□ 0.78
CDKL5O76039 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.93■□□□□ 0.78
CDKL5O76039 TUBB8P12-201ENST00000308911 1335 ntBASIC19.93■□□□□ 0.78
CDKL5O76039 TUBB7P-202ENST00000428444 1305 ntBASIC19.93■□□□□ 0.78
CDKL5O76039 TUBB8P7-204ENST00000567960 1332 ntBASIC19.93■□□□□ 0.78
CDKL5O76039 AC005915.1-201ENST00000624912 2018 ntBASIC19.93■□□□□ 0.78
CDKL5O76039 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL5O76039 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CDKL5O76039 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDKL5O76039 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.92■□□□□ 0.78
CDKL5O76039 AP002414.1-201ENST00000391405 1147 ntBASIC19.92■□□□□ 0.78
CDKL5O76039 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CDKL5O76039 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL5O76039 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.92■□□□□ 0.78
CDKL5O76039 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.92■□□□□ 0.78
CDKL5O76039 AF238378.1-201ENST00000526806 358 ntBASIC19.92■□□□□ 0.78
CDKL5O76039 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms