Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.44□□□□□ -0.26
ZNF253O75346 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.44□□□□□ -0.26
ZNF253O75346 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.44□□□□□ -0.26
ZNF253O75346 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.44□□□□□ -0.26
ZNF253O75346 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF253O75346 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF253O75346 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF253O75346 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF253O75346 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF253O75346 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.43□□□□□ -0.26
ZNF253O75346 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.43□□□□□ -0.26
ZNF253O75346 AC132872.4-202ENST00000622924 2756 ntBASIC13.43□□□□□ -0.26
ZNF253O75346 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.43□□□□□ -0.26
ZNF253O75346 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ZNF253O75346 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ZNF253O75346 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ZNF253O75346 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF253O75346 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF253O75346 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF253O75346 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF253O75346 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms