Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH16O75309 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH16O75309 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH16O75309 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH16O75309 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH16O75309 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH16O75309 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDH16O75309 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDH16O75309 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDH16O75309 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 FRMD8P1-201ENST00000440433 1524 ntBASIC17.38■□□□□ 0.37
CDH16O75309 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH16O75309 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 FAM8A6P-201ENST00000407496 1135 ntBASIC17.38■□□□□ 0.37
CDH16O75309 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.38■□□□□ 0.37
CDH16O75309 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 AC005363.2-201ENST00000618631 242 ntBASIC17.38■□□□□ 0.37
CDH16O75309 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 AC092364.2-201ENST00000596710 2692 ntBASIC17.38■□□□□ 0.37
CDH16O75309 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CDH16O75309 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH16O75309 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDH16O75309 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH16O75309 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH16O75309 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH16O75309 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH16O75309 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDH16O75309 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH16O75309 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH16O75309 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CDH16O75309 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH16O75309 GPR32P1-201ENST00000601788 811 ntBASIC17.37■□□□□ 0.37
CDH16O75309 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH16O75309 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH16O75309 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CDH16O75309 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH16O75309 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH16O75309 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH16O75309 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH16O75309 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH16O75309 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH16O75309 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CDH16O75309 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH16O75309 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH16O75309 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH16O75309 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH16O75309 AL138966.2-201ENST00000621997 464 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms