Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 YBX1P6-201ENST00000442962 1002 ntBASIC18.32■□□□□ 0.52
TNRC18O15417 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.32■□□□□ 0.52
TNRC18O15417 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.32■□□□□ 0.52
TNRC18O15417 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 RN7SL720P-201ENST00000488178 304 ntBASIC18.32■□□□□ 0.52
TNRC18O15417 SCARNA20.5-201ENST00000516991 142 ntBASIC18.32■□□□□ 0.52
TNRC18O15417 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.32■□□□□ 0.52
TNRC18O15417 RRP7BP-205ENST00000566851 833 ntBASIC18.32■□□□□ 0.52
TNRC18O15417 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TNRC18O15417 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 RNU1-129P-201ENST00000384064 167 ntBASIC18.31■□□□□ 0.52
TNRC18O15417 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.31■□□□□ 0.52
TNRC18O15417 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.31■□□□□ 0.52
TNRC18O15417 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.31■□□□□ 0.52
TNRC18O15417 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TNRC18O15417 U1.21-201ENST00000580816 167 ntBASIC18.31■□□□□ 0.52
TNRC18O15417 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
TNRC18O15417 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
TNRC18O15417 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.31■□□□□ 0.52
TNRC18O15417 FLJ13224-201ENST00000313737 1514 ntBASIC18.31■□□□□ 0.52
TNRC18O15417 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.31■□□□□ 0.52
TNRC18O15417 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.31■□□□□ 0.52
TNRC18O15417 MEP1AP4-201ENST00000423244 1087 ntBASIC18.31■□□□□ 0.52
TNRC18O15417 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TNRC18O15417 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.31■□□□□ 0.52
TNRC18O15417 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.31■□□□□ 0.52
TNRC18O15417 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNRC18O15417 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.31■□□□□ 0.52
TNRC18O15417 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TNRC18O15417 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.3■□□□□ 0.52
TNRC18O15417 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.3■□□□□ 0.52
TNRC18O15417 AC004898.1-201ENST00000451057 766 ntBASIC18.3■□□□□ 0.52
TNRC18O15417 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.3■□□□□ 0.52
TNRC18O15417 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 AC093010.1-201ENST00000473625 1624 ntBASIC18.3■□□□□ 0.52
TNRC18O15417 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 HLA-H-201ENST00000383620 1096 ntBASIC18.3■□□□□ 0.52
TNRC18O15417 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TNRC18O15417 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TNRC18O15417 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNRC18O15417 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TNRC18O15417 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.3■□□□□ 0.52
TNRC18O15417 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.3■□□□□ 0.52
TNRC18O15417 FTLP10-202ENST00000505798 471 ntBASIC18.3■□□□□ 0.52
TNRC18O15417 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.3■□□□□ 0.52
TNRC18O15417 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.3■□□□□ 0.52
TNRC18O15417 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.3■□□□□ 0.52
TNRC18O15417 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
TNRC18O15417 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNRC18O15417 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNRC18O15417 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.29■□□□□ 0.52
TNRC18O15417 AC005357.2-202ENST00000590507 1060 ntBASIC18.29■□□□□ 0.52
TNRC18O15417 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.29■□□□□ 0.52
TNRC18O15417 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNRC18O15417 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNRC18O15417 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.29■□□□□ 0.52
TNRC18O15417 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.29■□□□□ 0.52
TNRC18O15417 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.29■□□□□ 0.52
TNRC18O15417 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.29■□□□□ 0.52
TNRC18O15417 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.29■□□□□ 0.52
TNRC18O15417 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.29■□□□□ 0.52
TNRC18O15417 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.29■□□□□ 0.52
TNRC18O15417 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms