Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 INGX-201ENST00000359239 846 ntBASIC11.79□□□□□ -0.52
NDUFA1O15239 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NDUFA1O15239 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 ECEL1P3-201ENST00000427961 737 ntBASIC11.79□□□□□ -0.52
NDUFA1O15239 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
NDUFA1O15239 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.79□□□□□ -0.52
NDUFA1O15239 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 AL157888.1-201ENST00000631930 593 ntBASIC11.79□□□□□ -0.52
NDUFA1O15239 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NDUFA1O15239 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 LINC01568-207ENST00000641790 1380 ntBASIC11.79□□□□□ -0.52
NDUFA1O15239 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NDUFA1O15239 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA1O15239 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA1O15239 AC093525.9-201ENST00000624961 1746 ntBASIC11.78□□□□□ -0.52
NDUFA1O15239 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NDUFA1O15239 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 AC105917.1-201ENST00000506637 2539 ntBASIC11.78□□□□□ -0.52
NDUFA1O15239 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 KRT18P65-201ENST00000439811 1286 ntBASIC11.78□□□□□ -0.52
NDUFA1O15239 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFA1O15239 AC024563.2-201ENST00000603282 481 ntBASIC11.78□□□□□ -0.52
NDUFA1O15239 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFA1O15239 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFA1O15239 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFA1O15239 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
NDUFA1O15239 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFA1O15239 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.77□□□□□ -0.52
NDUFA1O15239 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.77□□□□□ -0.52
NDUFA1O15239 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms