Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 NSUN5P1-202ENST00000421140 1535 ntBASIC16.65■□□□□ 0.26
UBFD1O14562 NSUN5P2-203ENST00000457352 1529 ntBASIC16.65■□□□□ 0.26
UBFD1O14562 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBFD1O14562 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
UBFD1O14562 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 IGHV3-47-201ENST00000425060 335 ntBASIC16.65■□□□□ 0.26
UBFD1O14562 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
UBFD1O14562 KRT17P6-201ENST00000453795 1220 ntBASIC16.65■□□□□ 0.26
UBFD1O14562 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.65■□□□□ 0.26
UBFD1O14562 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.65■□□□□ 0.26
UBFD1O14562 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.65■□□□□ 0.26
UBFD1O14562 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.65■□□□□ 0.26
UBFD1O14562 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.65■□□□□ 0.26
UBFD1O14562 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UBFD1O14562 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.65■□□□□ 0.26
UBFD1O14562 AP000867.4-201ENST00000641616 219 ntBASIC16.65■□□□□ 0.26
UBFD1O14562 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.65■□□□□ 0.26
UBFD1O14562 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBFD1O14562 OR6D1P-202ENST00000641007 5290 ntBASIC16.65■□□□□ 0.26
UBFD1O14562 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBFD1O14562 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.65■□□□□ 0.26
UBFD1O14562 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBFD1O14562 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
UBFD1O14562 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.65■□□□□ 0.26
UBFD1O14562 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.65■□□□□ 0.26
UBFD1O14562 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
UBFD1O14562 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBFD1O14562 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UBFD1O14562 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UBFD1O14562 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBFD1O14562 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBFD1O14562 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBFD1O14562 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.64■□□□□ 0.25
UBFD1O14562 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.64■□□□□ 0.25
UBFD1O14562 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.64■□□□□ 0.25
UBFD1O14562 TOB2P1-201ENST00000469761 992 ntBASIC16.64■□□□□ 0.25
UBFD1O14562 AC096582.2-201ENST00000510860 516 ntBASIC16.64■□□□□ 0.25
UBFD1O14562 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.64■□□□□ 0.25
UBFD1O14562 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.64■□□□□ 0.25
UBFD1O14562 AP002414.4-201ENST00000589764 1148 ntBASIC16.64■□□□□ 0.25
UBFD1O14562 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
UBFD1O14562 AL391256.1-201ENST00000443260 1855 ntBASIC16.64■□□□□ 0.25
UBFD1O14562 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
UBFD1O14562 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 AC004817.3-201ENST00000602957 2129 ntBASIC16.64■□□□□ 0.25
UBFD1O14562 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.64■□□□□ 0.25
UBFD1O14562 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBFD1O14562 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
UBFD1O14562 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
UBFD1O14562 AC092364.2-201ENST00000596710 2692 ntBASIC16.63■□□□□ 0.25
UBFD1O14562 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.63■□□□□ 0.25
UBFD1O14562 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBFD1O14562 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBFD1O14562 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBFD1O14562 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms