Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 AC026748.1-201ENST00000624349 3251 ntBASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CHKB-CPT1BH3BT56 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 AL109976.1-201ENST00000621919 5678 ntBASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 LHPP-203ENST00000392757 840 ntTSL 3 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 AC004987.1-201ENST00000428627 508 ntBASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 AC103834.1-201ENST00000520383 144 ntBASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 TRIR-202ENST00000588213 841 ntTSL 3 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 AC011298.3-201ENST00000615796 283 ntBASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 HLA-DQB1-201ENST00000374943 1656 ntBASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CHKB-CPT1BH3BT56 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 RET-205ENST00000615310 4337 ntTSL 5 BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CHKB-CPT1BH3BT56 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms