Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ACTG1P14-201ENST00000446382 1122 ntBASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CEND1P1-201ENST00000451006 455 ntBASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL645728.2-201ENST00000641974 660 ntBASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DNAJB3-202ENST00000449667 1266 ntBASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC107918.2-201ENST00000530817 355 ntBASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SNHG9-202ENST00000564014 471 ntBASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC005412.3-201ENST00000580309 715 ntBASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC091812.2-201ENST00000619081 385 ntBASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NOC2LP2-201ENST00000407594 1944 ntBASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms