Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00473A8K010 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00473A8K010 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
LINC00473A8K010 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00473A8K010 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00473A8K010 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00473A8K010 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00473A8K010 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00473A8K010 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00473A8K010 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00473A8K010 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00473A8K010 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00473A8K010 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC00473A8K010 IGHV3-47-201ENST00000425060 335 ntBASIC13.98□□□□□ -0.17
LINC00473A8K010 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00473A8K010 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00473A8K010 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00473A8K010 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00473A8K010 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC00473A8K010 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00473A8K010 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00473A8K010 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00473A8K010 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC00473A8K010 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC00473A8K010 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC00473A8K010 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00473A8K010 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00473A8K010 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC00473A8K010 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00473A8K010 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00473A8K010 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 LINC00265-3P-201ENST00000447588 903 ntBASIC13.97□□□□□ -0.17
LINC00473A8K010 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00473A8K010 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00473A8K010 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00473A8K010 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms