Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 AC092068.3-201ENST00000587894 2016 ntBASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
YJEFN3A6XGL0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 MED15P5-201ENST00000423150 992 ntBASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 AC060834.1-201ENST00000443027 2032 ntBASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 KRT18P2-201ENST00000447938 1258 ntBASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 HCG4B-203ENST00000450128 991 ntBASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 KRT18P58-201ENST00000527480 1120 ntBASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
YJEFN3A6XGL0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 FAM197Y3-203ENST00000618346 717 ntBASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.84■□□□□ 0.45
YJEFN3A6XGL0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.83■□□□□ 0.45
YJEFN3A6XGL0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 AL591424.1-201ENST00000442569 1213 ntBASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 KRT18P3-201ENST00000451602 1288 ntBASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 AC107918.2-201ENST00000530817 355 ntBASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 AC124947.2-201ENST00000547118 1133 ntBASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.83■□□□□ 0.44
YJEFN3A6XGL0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms