Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 AL513523.2-202ENST00000427283 2040 ntBASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 AC012618.2-201ENST00000428058 849 ntBASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 AC024563.2-201ENST00000603282 481 ntBASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 AC010653.2-201ENST00000623505 997 ntBASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.77□□□□□ -0.05
MEIS3P1A6NDR6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 FITM1-202ENST00000559294 800 ntBASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 C2orf69P3-201ENST00000565542 1120 ntBASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AC004263.2-201ENST00000617183 678 ntBASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.76□□□□□ -0.05
MEIS3P1A6NDR6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 AP002414.2-201ENST00000591780 3365 ntBASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 AC103702.1-201ENST00000548801 2630 ntBASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 AL158047.1-201ENST00000445918 881 ntBASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.75□□□□□ -0.05
MEIS3P1A6NDR6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms