Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 AC098831.1-202ENST00000438821 336 ntBASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 POLD2P1-201ENST00000511220 997 ntBASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 AL022326.1-202ENST00000641533 845 ntBASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPDC1A2A3K4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AC148477.5-201ENST00000625164 1645 ntBASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 AC104109.2-201ENST00000602919 1418 ntBASIC20.19■□□□□ 0.82
PTPDC1A2A3K4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 SPDYE21P-201ENST00000413323 827 ntBASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 IGHV3-22-201ENST00000520721 359 ntBASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AC105339.3-201ENST00000560043 636 ntBASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AC106886.4-201ENST00000623557 2502 ntBASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 AP002414.3-201ENST00000589352 1468 ntBASIC20.18■□□□□ 0.82
PTPDC1A2A3K4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPDC1A2A3K4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms