Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 AL513190.1-201ENST00000621254 727 ntBASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB2Q9Y5E7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB2Q9Y5E7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB2Q9Y5E7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB2Q9Y5E7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB2Q9Y5E7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
PCDHB2Q9Y5E7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB2Q9Y5E7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 RPS8P6-201ENST00000426177 609 ntBASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 AC004967.1-201ENST00000453589 447 ntBASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 AC096734.2-201ENST00000562054 433 ntBASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 AC010507.1-201ENST00000633895 436 ntBASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 AC134684.3-201ENST00000641758 218 ntBASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB2Q9Y5E7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 AC004877.2-201ENST00000623941 599 ntBASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms