Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 AL596275.1-201ENST00000423464 877 ntBASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 MIR4497-201ENST00000583208 89 ntBASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 AL049637.2-201ENST00000641778 930 ntBASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH1Q9Y2L9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRCH1Q9Y2L9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AC073347.1-201ENST00000421633 2643 ntBASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AC063926.3-201ENST00000624734 5658 ntBASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms