Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 AP001094.4-201ENST00000579008 2176 ntBASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 AC116353.5-201ENST00000638148 1699 ntBASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 PMS2P4-201ENST00000412466 1052 ntBASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 RNA5SP421-201ENST00000516864 134 ntBASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 AC073592.5-201ENST00000624854 528 ntBASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
HPS5Q9UPZ3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 AC046185.3-201ENST00000623228 1824 ntBASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 AC012313.1-201ENST00000593393 3059 ntBASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS5Q9UPZ3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 VN2R19P-201ENST00000442399 1052 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 HCG4B-203ENST00000450128 991 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 AC016396.2-201ENST00000562575 1417 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 MIR4751-201ENST00000578027 74 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 AC004835.2-201ENST00000603762 682 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 AC009336.1-201ENST00000608941 1553 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 AC148477.5-201ENST00000625164 1645 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 LTB4R2-202ENST00000528054 3092 ntBASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS5Q9UPZ3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HPS5Q9UPZ3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms