Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 HMGB1P8-201ENST00000558211 949 ntBASIC16.28■□□□□ 0.2
LHX6Q9UPM6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.28■□□□□ 0.2
LHX6Q9UPM6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 AL353729.2-201ENST00000605859 1249 ntBASIC16.28■□□□□ 0.2
LHX6Q9UPM6 AC026120.1-201ENST00000611536 926 ntBASIC16.28■□□□□ 0.2
LHX6Q9UPM6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 KRT18P32-201ENST00000424695 1287 ntBASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AP001059.3-201ENST00000619053 235 ntBASIC16.27■□□□□ 0.2
LHX6Q9UPM6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AC068587.10-201ENST00000641210 219 ntBASIC16.27■□□□□ 0.2
LHX6Q9UPM6 AC099398.1-201ENST00000567919 2776 ntBASIC16.27■□□□□ 0.2
LHX6Q9UPM6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LHX6Q9UPM6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AC004945.1-201ENST00000416738 983 ntBASIC16.26■□□□□ 0.19
LHX6Q9UPM6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 MTND2P25-201ENST00000449028 610 ntBASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AC092658.1-201ENST00000505836 891 ntBASIC16.26■□□□□ 0.19
LHX6Q9UPM6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AC010336.2-201ENST00000564226 506 ntBASIC16.26■□□□□ 0.19
LHX6Q9UPM6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX6Q9UPM6 AD001527.2-201ENST00000622994 785 ntBASIC16.26■□□□□ 0.19
LHX6Q9UPM6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms