Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 AC008738.7-201ENST00000609744 511 ntBASIC21.62■■□□□ 1.05
CCNL1Q9UK58 MIR6799-201ENST00000620297 69 ntBASIC21.62■■□□□ 1.05
CCNL1Q9UK58 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 AC007541.1-201ENST00000570282 1469 ntBASIC21.62■■□□□ 1.05
CCNL1Q9UK58 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 LYSMD4-203ENST00000378904 2122 ntBASIC21.61■■□□□ 1.05
CCNL1Q9UK58 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AC105233.2-201ENST00000523697 349 ntBASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AF228730.5-201ENST00000530288 346 ntBASIC21.61■■□□□ 1.05
CCNL1Q9UK58 API5-211ENST00000534695 560 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AC009407.1-201ENST00000568958 598 ntBASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AC091167.2-201ENST00000579581 588 ntBASIC21.61■■□□□ 1.05
CCNL1Q9UK58 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNL1Q9UK58 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 AC140912.1-201ENST00000577171 1054 ntBASIC21.6■■□□□ 1.05
CCNL1Q9UK58 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNL1Q9UK58 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 GIMAP3P-201ENST00000495150 836 ntBASIC21.59■■□□□ 1.05
CCNL1Q9UK58 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNL1Q9UK58 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms