Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 GPR89P-201ENST00000407924 1495 ntBASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 AP002490.2-201ENST00000524791 560 ntBASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 AL138831.2-201ENST00000606564 490 ntBASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 AC073508.3-201ENST00000619697 1419 ntBASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CDC42SE2Q9NRR3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 AL135999.2-201ENST00000622438 1686 ntBASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms