Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 MINOS1P3-201ENST00000457048 203 ntBASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 AC116407.4-201ENST00000623319 1061 ntBASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 UBALD1-205ENST00000590891 2641 ntBASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 AC078925.2-201ENST00000624013 1973 ntBASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 DRAXINP1-201ENST00000437611 948 ntBASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRTM1Q9HBL6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 KRT17P6-201ENST00000453795 1220 ntBASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 AC096582.2-201ENST00000510860 516 ntBASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 TPSP2-201ENST00000561760 610 ntBASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms