Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 AC108073.2-201ENST00000464002 357 ntBASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 AC112482.1-201ENST00000492080 688 ntBASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 AC002347.1-201ENST00000569543 541 ntBASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ATP6V0A4Q9HBG4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 AC004832.2-201ENST00000426397 482 ntBASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 AC064836.3-201ENST00000607928 673 ntBASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V0A4Q9HBG4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 AC023274.1-201ENST00000418278 595 ntBASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V0A4Q9HBG4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms