Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 HCG4P8-203ENST00000443049 980 ntBASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 MIR3652-201ENST00000579335 131 ntBASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 AP005117.1-201ENST00000584346 1413 ntBASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.46■□□□□ 0.38
LRRC40Q9H9A6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LRRC40Q9H9A6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
LRRC40Q9H9A6 AGGF1P2-201ENST00000426656 2106 ntBASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 AC132008.2-207ENST00000454517 770 ntBASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 AP001269.4-201ENST00000609611 512 ntBASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC40Q9H9A6 AC097637.2-201ENST00000624096 1997 ntBASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 AC124067.4-201ENST00000519691 2379 ntBASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 FRMD8P1-201ENST00000440433 1524 ntBASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 AC106795.1-205ENST00000512851 1056 ntBASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC40Q9H9A6 AC092068.3-201ENST00000587894 2016 ntBASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms