Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC092068.3-201ENST00000587894 2016 ntBASIC17.33■□□□□ 0.37
VPS11Q9H270 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS11Q9H270 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.33■□□□□ 0.37
VPS11Q9H270 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.33■□□□□ 0.37
VPS11Q9H270 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS11Q9H270 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS11Q9H270 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
VPS11Q9H270 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VPS11Q9H270 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS11Q9H270 AC124947.2-201ENST00000547118 1133 ntBASIC17.33■□□□□ 0.36
VPS11Q9H270 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS11Q9H270 PCDHB17P-201ENST00000539533 2393 ntBASIC17.33■□□□□ 0.36
VPS11Q9H270 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 AC008894.3-201ENST00000624324 3103 ntBASIC17.33■□□□□ 0.36
VPS11Q9H270 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
VPS11Q9H270 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
VPS11Q9H270 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS11Q9H270 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS11Q9H270 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VPS11Q9H270 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS11Q9H270 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS11Q9H270 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS11Q9H270 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS11Q9H270 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS11Q9H270 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
VPS11Q9H270 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 MYCLP1-201ENST00000372451 1075 ntBASIC17.32■□□□□ 0.36
VPS11Q9H270 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 AC092647.4-201ENST00000457211 535 ntBASIC17.32■□□□□ 0.36
VPS11Q9H270 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS11Q9H270 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS11Q9H270 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.32■□□□□ 0.36
VPS11Q9H270 AC012306.2-201ENST00000609350 630 ntBASIC17.32■□□□□ 0.36
VPS11Q9H270 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.32■□□□□ 0.36
VPS11Q9H270 HYMAI.1-201ENST00000620949 238 ntBASIC17.32■□□□□ 0.36
VPS11Q9H270 AC097493.4-201ENST00000641197 219 ntBASIC17.32■□□□□ 0.36
VPS11Q9H270 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VPS11Q9H270 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.32■□□□□ 0.36
VPS11Q9H270 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS11Q9H270 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS11Q9H270 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS11Q9H270 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS11Q9H270 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 AC092171.3-201ENST00000610122 2651 ntBASIC17.31■□□□□ 0.36
VPS11Q9H270 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 AK4P3-201ENST00000418260 669 ntBASIC17.31■□□□□ 0.36
VPS11Q9H270 AC007967.3-201ENST00000434308 558 ntBASIC17.31■□□□□ 0.36
VPS11Q9H270 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 AC019129.2-201ENST00000609837 1235 ntBASIC17.31■□□□□ 0.36
VPS11Q9H270 AC073912.3-201ENST00000624414 853 ntBASIC17.31■□□□□ 0.36
VPS11Q9H270 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS11Q9H270 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VPS11Q9H270 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms