Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 AC010460.3-201ENST00000511359 1579 ntBASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 AC109462.3-201ENST00000573934 613 ntBASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
COMMD4Q9H0A8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 MIR662-201ENST00000384847 95 ntBASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 AC111152.3-201ENST00000569699 673 ntBASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 AC012306.2-201ENST00000609350 630 ntBASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 AC097493.4-201ENST00000641197 219 ntBASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COMMD4Q9H0A8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
COMMD4Q9H0A8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms