Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDH11XQ9BZA7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.08■■□□□ 1.12
PCDH11XQ9BZA7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 AL512638.1-201ENST00000457493 794 ntBASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 AP001350.2-201ENST00000625104 1094 ntBASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH11XQ9BZA7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 AC131009.4-201ENST00000624048 1740 ntBASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 SLC25A1P3-201ENST00000395415 828 ntBASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 MIR4453-201ENST00000584019 89 ntBASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH11XQ9BZA7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 GAPDHP21-201ENST00000450301 1010 ntBASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 AC004890.2-204ENST00000481968 304 ntBASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH11XQ9BZA7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 AC142381.1-201ENST00000426099 345 ntBASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 AC241585.1-201ENST00000433527 519 ntBASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 CRB3P1-201ENST00000449338 276 ntBASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms