Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC004890.2-204ENST00000481968 304 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 AP005018.1-201ENST00000525475 301 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 U1.21-201ENST00000580816 167 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 MIR6080-201ENST00000617359 66 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 CRB3P1-201ENST00000449338 276 ntBASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 AC027307.2-201ENST00000591252 911 ntBASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RTFDC1Q9BY42 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 AL512638.1-201ENST00000457493 794 ntBASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.68■□□□□ 0.9
RTFDC1Q9BY42 SLC22A20-204ENST00000530038 1673 ntBASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 MRPS18AP1-201ENST00000414458 589 ntBASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 AL031055.1-201ENST00000606362 631 ntBASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 AL355312.1-201ENST00000407115 2176 ntBASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTFDC1Q9BY42 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms