Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 AC122714.2-201ENST00000502787 707 ntBASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 AC093909.1-201ENST00000504731 1122 ntBASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 RNPS1P1-201ENST00000507437 918 ntBASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 HLA-A-201ENST00000376802 1334 ntBASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 CICP6-201ENST00000457191 2729 ntBASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 COX5BP2-201ENST00000392354 334 ntBASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SART3-203ENST00000546611 1184 ntBASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 AC148477.8-201ENST00000624298 468 ntBASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 NKILA-202ENST00000614771 2598 ntBASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
PCGF1Q9BSM1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AC011676.5-201ENST00000624864 2660 ntBASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AL031284.1-201ENST00000419297 478 ntBASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AC103564.2-201ENST00000432853 1299 ntBASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms