Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 AC006538.1-201ENST00000567905 1585 ntBASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 AC246785.2-201ENST00000432512 513 ntBASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 AC009533.2-201ENST00000543664 586 ntBASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 AC011840.4-201ENST00000578471 627 ntBASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 AC097493.4-201ENST00000641197 219 ntBASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BPIFA3Q9BQP9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 TSPY22P-201ENST00000427496 604 ntBASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 AC011467.2-201ENST00000598425 242 ntBASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
BPIFA3Q9BQP9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 AC006011.2-201ENST00000621313 1158 ntBASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BPIFA3Q9BQP9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BPIFA3Q9BQP9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms