Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PKP4Q99569 AC073648.2-201ENST00000510116 352 ntBASIC16.74■□□□□ 0.27
PKP4Q99569 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.74■□□□□ 0.27
PKP4Q99569 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PKP4Q99569 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PKP4Q99569 AC104692.2-201ENST00000603054 253 ntBASIC16.74■□□□□ 0.27
PKP4Q99569 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.74■□□□□ 0.27
PKP4Q99569 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PKP4Q99569 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PKP4Q99569 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.74■□□□□ 0.27
PKP4Q99569 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PKP4Q99569 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PKP4Q99569 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PKP4Q99569 GPR89P-201ENST00000407924 1495 ntBASIC16.73■□□□□ 0.27
PKP4Q99569 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.73■□□□□ 0.27
PKP4Q99569 AL590787.1-201ENST00000568856 1315 ntBASIC16.73■□□□□ 0.27
PKP4Q99569 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PKP4Q99569 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
PKP4Q99569 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.73■□□□□ 0.27
PKP4Q99569 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.73■□□□□ 0.27
PKP4Q99569 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.73■□□□□ 0.27
PKP4Q99569 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.73■□□□□ 0.27
PKP4Q99569 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PKP4Q99569 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.73■□□□□ 0.27
PKP4Q99569 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.73■□□□□ 0.27
PKP4Q99569 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
PKP4Q99569 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.73■□□□□ 0.27
PKP4Q99569 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.73■□□□□ 0.27
PKP4Q99569 AL139424.1-201ENST00000607572 797 ntBASIC16.73■□□□□ 0.27
PKP4Q99569 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 AC060834.1-201ENST00000443027 2032 ntBASIC16.73■□□□□ 0.27
PKP4Q99569 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.73■□□□□ 0.27
PKP4Q99569 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.73■□□□□ 0.27
PKP4Q99569 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKP4Q99569 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP4Q99569 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 HNRNPDP1-201ENST00000439535 754 ntBASIC16.72■□□□□ 0.27
PKP4Q99569 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP4Q99569 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 AC004706.3-202ENST00000621574 984 ntBASIC16.72■□□□□ 0.27
PKP4Q99569 AC148477.8-201ENST00000624298 468 ntBASIC16.72■□□□□ 0.27
PKP4Q99569 AC107918.4-202ENST00000641623 219 ntBASIC16.72■□□□□ 0.27
PKP4Q99569 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP4Q99569 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP4Q99569 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP4Q99569 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP4Q99569 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PKP4Q99569 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP4Q99569 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PKP4Q99569 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms