Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 AC005104.2-201ENST00000427818 678 ntBASIC13.74□□□□□ -0.21
RNF2Q99496 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF2Q99496 AL671277.2-201ENST00000458060 996 ntBASIC13.74□□□□□ -0.21
RNF2Q99496 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF2Q99496 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF2Q99496 ZNF444P1-201ENST00000559497 298 ntBASIC13.74□□□□□ -0.21
RNF2Q99496 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.74□□□□□ -0.21
RNF2Q99496 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF2Q99496 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF2Q99496 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF2Q99496 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF2Q99496 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF2Q99496 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF2Q99496 AL136379.1-201ENST00000623471 2642 ntBASIC13.74□□□□□ -0.21
RNF2Q99496 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF2Q99496 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 AC116353.5-201ENST00000638148 1699 ntBASIC13.73□□□□□ -0.21
RNF2Q99496 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF2Q99496 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF2Q99496 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.73□□□□□ -0.21
RNF2Q99496 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF2Q99496 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF2Q99496 VENTXP5-201ENST00000523979 775 ntBASIC13.73□□□□□ -0.21
RNF2Q99496 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF2Q99496 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.73□□□□□ -0.21
RNF2Q99496 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF2Q99496 KRT89P-201ENST00000620027 1478 ntBASIC13.73□□□□□ -0.21
RNF2Q99496 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF2Q99496 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF2Q99496 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms