Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.22■□□□□ 0.19
NR1H4Q96RI1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AC093525.9-201ENST00000624961 1746 ntBASIC16.22■□□□□ 0.19
NR1H4Q96RI1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 RARRES2P10-201ENST00000564312 460 ntBASIC16.21■□□□□ 0.19
NR1H4Q96RI1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H4Q96RI1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.21■□□□□ 0.18
NR1H4Q96RI1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.21■□□□□ 0.18
NR1H4Q96RI1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NR1H4Q96RI1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.21■□□□□ 0.18
NR1H4Q96RI1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NR1H4Q96RI1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NR1H4Q96RI1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 HLA-A-202ENST00000376806 1854 ntBASIC16.2■□□□□ 0.18
NR1H4Q96RI1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 CICP13-201ENST00000422015 2789 ntBASIC16.2■□□□□ 0.18
NR1H4Q96RI1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 KRT17P3-201ENST00000420566 1262 ntBASIC16.2■□□□□ 0.18
NR1H4Q96RI1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 AC004264.1-201ENST00000608354 794 ntBASIC16.2■□□□□ 0.18
NR1H4Q96RI1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms