Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 HLA-A-202ENST00000376806 1854 ntBASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IPQ96QF0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 NIFKP9-201ENST00000419265 221 ntBASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IPQ96QF0 AC006058.4-201ENST00000624016 1670 ntBASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 FAM45BP-202ENST00000592932 1624 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms