Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 AL356309.3-201ENST00000624132 1934 ntBASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 LINC00982-205ENST00000420957 435 ntBASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 PRYP5-201ENST00000451909 266 ntBASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 LINC01711-201ENST00000598340 967 ntBASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 AC005915.1-201ENST00000624912 2018 ntBASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 MTDHP3-201ENST00000594186 672 ntBASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 AC008608.2-201ENST00000606089 416 ntBASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 AL355877.3-201ENST00000622820 899 ntBASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MS4A4EQ96PG1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 NCF1C-201ENST00000438382 1427 ntBASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 AC105020.1-201ENST00000435356 2205 ntBASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 REXO1L6P-202ENST00000619970 1078 ntBASIC16.02■□□□□ 0.16
MS4A4EQ96PG1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms