Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 HLA-L-209ENST00000420110 1011 ntBASIC13.06□□□□□ -0.32
AP1S3Q96PC3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 DUTP2-201ENST00000519164 463 ntBASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 MIR3180-4-201ENST00000582223 153 ntBASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC008687.5-201ENST00000593746 558 ntBASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PEG13-201ENST00000631594 5667 ntBASIC13.05□□□□□ -0.32
AP1S3Q96PC3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 FAM197Y1-201ENST00000421178 764 ntBASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AC097488.1-201ENST00000507834 756 ntBASIC13.05□□□□□ -0.32
AP1S3Q96PC3 KRT18P6-201ENST00000555540 1265 ntBASIC13.05□□□□□ -0.32
AP1S3Q96PC3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AL024508.2-201ENST00000607749 1894 ntBASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP1S3Q96PC3 PCDHB17P-201ENST00000539533 2393 ntBASIC13.05□□□□□ -0.32
AP1S3Q96PC3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms