Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 AL139424.1-201ENST00000607572 797 ntBASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PDLIM5Q96HC4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 FLJ38576-201ENST00000623820 2459 ntBASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.27
PDLIM5Q96HC4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 AC008608.2-201ENST00000606089 416 ntBASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 AL021920.2-201ENST00000624828 1351 ntBASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.76■□□□□ 0.27
PDLIM5Q96HC4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 SCARNA2-201ENST00000458748 420 ntBASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 SART3-203ENST00000546611 1184 ntBASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 AC139887.3-201ENST00000568585 713 ntBASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 LINC01711-201ENST00000598340 967 ntBASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 AC243591.1-201ENST00000452967 1364 ntBASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 RNF216P1-203ENST00000404404 2427 ntBASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM5Q96HC4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 AKR1C7P-201ENST00000305623 895 ntBASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 MTDHP4-201ENST00000600287 670 ntBASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 AC004706.3-202ENST00000621574 984 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms