Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 KRT18P67-201ENST00000432816 1264 ntBASIC17.75■□□□□ 0.43
IFT43Q96FT9 AC132008.2-207ENST00000454517 770 ntBASIC17.75■□□□□ 0.43
IFT43Q96FT9 AP001005.1-201ENST00000571755 1248 ntBASIC17.75■□□□□ 0.43
IFT43Q96FT9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 AC019129.2-201ENST00000609837 1235 ntBASIC17.75■□□□□ 0.43
IFT43Q96FT9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT43Q96FT9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT43Q96FT9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 INTS4P1-201ENST00000438455 1935 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 FAM197Y8-203ENST00000450145 560 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 AF186996.4-201ENST00000467186 377 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 AC008608.2-201ENST00000606089 416 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 AL139327.4-201ENST00000612362 153 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 AL355877.3-201ENST00000622820 899 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 TP73-AS1-207ENST00000624167 988 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.74■□□□□ 0.43
IFT43Q96FT9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 LYSMD4-203ENST00000378904 2122 ntBASIC17.74■□□□□ 0.43
IFT43Q96FT9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFT43Q96FT9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.73■□□□□ 0.43
IFT43Q96FT9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFT43Q96FT9 AC079776.4-201ENST00000511039 504 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms