Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RPSAP43-201ENST00000402237 625 ntBASIC16.61■□□□□ 0.25
RNF31Q96EP0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 GPX1P2-201ENST00000429271 606 ntBASIC16.61■□□□□ 0.25
RNF31Q96EP0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 AC103564.2-201ENST00000432853 1299 ntBASIC16.61■□□□□ 0.25
RNF31Q96EP0 AC108073.2-201ENST00000464002 357 ntBASIC16.61■□□□□ 0.25
RNF31Q96EP0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 AC073592.4-201ENST00000623827 446 ntBASIC16.61■□□□□ 0.25
RNF31Q96EP0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 AC141586.5-201ENST00000624546 2050 ntBASIC16.6■□□□□ 0.25
RNF31Q96EP0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 STK19B-204ENST00000512515 211 ntBASIC16.6■□□□□ 0.25
RNF31Q96EP0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 AC006557.2-201ENST00000592985 1240 ntBASIC16.6■□□□□ 0.25
RNF31Q96EP0 AC004790.2-201ENST00000623588 572 ntBASIC16.6■□□□□ 0.25
RNF31Q96EP0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF31Q96EP0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF31Q96EP0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 UPF3AP3-201ENST00000420996 769 ntBASIC16.59■□□□□ 0.25
RNF31Q96EP0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 AL596442.2-201ENST00000610240 980 ntBASIC16.59■□□□□ 0.25
RNF31Q96EP0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 AL513190.1-201ENST00000621254 727 ntBASIC16.59■□□□□ 0.25
RNF31Q96EP0 AC004706.3-202ENST00000621574 984 ntBASIC16.59■□□□□ 0.25
RNF31Q96EP0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF31Q96EP0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF31Q96EP0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms