Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 AL591684.3-201ENST00000605187 298 ntBASIC17.51■□□□□ 0.39
RTP4Q96DX8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.51■□□□□ 0.39
RTP4Q96DX8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 AL603756.1-201ENST00000606511 2163 ntBASIC17.5■□□□□ 0.39
RTP4Q96DX8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 AL645728.1-201ENST00000366221 2101 ntBASIC17.5■□□□□ 0.39
RTP4Q96DX8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 PCDHB19P-201ENST00000570871 2371 ntBASIC17.5■□□□□ 0.39
RTP4Q96DX8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 KRT18P31-201ENST00000506277 1292 ntBASIC17.5■□□□□ 0.39
RTP4Q96DX8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 AC106795.1-205ENST00000512851 1056 ntBASIC17.5■□□□□ 0.39
RTP4Q96DX8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 AP001269.4-201ENST00000609611 512 ntBASIC17.5■□□□□ 0.39
RTP4Q96DX8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
RTP4Q96DX8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTP4Q96DX8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 LINC01711-201ENST00000598340 967 ntBASIC17.49■□□□□ 0.39
RTP4Q96DX8 AL353135.1-201ENST00000606729 504 ntBASIC17.49■□□□□ 0.39
RTP4Q96DX8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTP4Q96DX8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RTP4Q96DX8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms