Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 TREML5P-201ENST00000421694 576 ntBASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 IGHV3-42-201ENST00000520410 361 ntBASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC005225.4-201ENST00000557330 545 ntBASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 AC008677.1-201ENST00000519230 1561 ntBASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRNP40Q96DI7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 UXT-AS1-201ENST00000590504 1525 ntBASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 HMGA1P7-201ENST00000406908 502 ntBASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 SLC25A39P2-201ENST00000537614 270 ntBASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 AL139327.4-201ENST00000612362 153 ntBASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRNP40Q96DI7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 KRT8P23-201ENST00000560090 1207 ntBASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 LINC01225-203ENST00000563550 1244 ntBASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 AC026150.2-201ENST00000564693 1156 ntBASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 LINC02560-201ENST00000596379 459 ntBASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 AL390754.1-201ENST00000619088 582 ntBASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SNRNP40Q96DI7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms