Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 MST1L-201ENST00000442552 2185 ntBASIC16.57■□□□□ 0.24
VPS33AQ96AX1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VPS33AQ96AX1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 AL662844.4-201ENST00000606367 2838 ntBASIC16.56■□□□□ 0.24
VPS33AQ96AX1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 MYCLP1-201ENST00000372451 1075 ntBASIC16.56■□□□□ 0.24
VPS33AQ96AX1 AC117947.1-201ENST00000427448 529 ntBASIC16.56■□□□□ 0.24
VPS33AQ96AX1 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.56■□□□□ 0.24
VPS33AQ96AX1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 IGHV3-52-201ENST00000519770 353 ntBASIC16.56■□□□□ 0.24
VPS33AQ96AX1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.56■□□□□ 0.24
VPS33AQ96AX1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS33AQ96AX1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 TERF1P1-201ENST00000311003 1181 ntBASIC16.55■□□□□ 0.24
VPS33AQ96AX1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 AC113347.1-201ENST00000413321 391 ntBASIC16.55■□□□□ 0.24
VPS33AQ96AX1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 BX664615.1-201ENST00000443558 458 ntBASIC16.55■□□□□ 0.24
VPS33AQ96AX1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 AC012306.2-201ENST00000609350 630 ntBASIC16.55■□□□□ 0.24
VPS33AQ96AX1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms