Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2E3Q969T4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 BX005266.1-201ENST00000473402 457 ntBASIC16.53■□□□□ 0.24
UBE2E3Q969T4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 NKAPP1-205ENST00000585790 367 ntBASIC16.53■□□□□ 0.24
UBE2E3Q969T4 AC008608.2-201ENST00000606089 416 ntBASIC16.53■□□□□ 0.24
UBE2E3Q969T4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.53■□□□□ 0.24
UBE2E3Q969T4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2E3Q969T4 AC004817.3-201ENST00000602957 2129 ntBASIC16.52■□□□□ 0.24
UBE2E3Q969T4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 AD000864.1-201ENST00000624076 2295 ntBASIC16.52■□□□□ 0.24
UBE2E3Q969T4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.52■□□□□ 0.24
UBE2E3Q969T4 KRT18P56-201ENST00000507275 550 ntBASIC16.52■□□□□ 0.24
UBE2E3Q969T4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.52■□□□□ 0.24
UBE2E3Q969T4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 AL589182.2-201ENST00000619332 1049 ntBASIC16.52■□□□□ 0.24
UBE2E3Q969T4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2E3Q969T4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2E3Q969T4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms