Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 NME2P1-201ENST00000426182 414 ntBASIC21.78■■□□□ 1.08
SMARCC1Q92922 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 AC027369.6-201ENST00000525520 931 ntBASIC21.78■■□□□ 1.08
SMARCC1Q92922 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 AL596325.1-201ENST00000563991 1082 ntBASIC21.78■■□□□ 1.08
SMARCC1Q92922 AP000974.1-201ENST00000623909 2387 ntBASIC21.78■■□□□ 1.08
SMARCC1Q92922 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 AC100757.3-201ENST00000622361 1406 ntBASIC21.78■■□□□ 1.08
SMARCC1Q92922 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC1Q92922 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC1Q92922 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 OR8S1-201ENST00000310194 1080 ntBASIC21.77■■□□□ 1.08
SMARCC1Q92922 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 TSSK5P-201ENST00000423978 907 ntBASIC21.77■■□□□ 1.08
SMARCC1Q92922 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.77■■□□□ 1.08
SMARCC1Q92922 AL138781.2-201ENST00000617896 1843 ntBASIC21.77■■□□□ 1.08
SMARCC1Q92922 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC1Q92922 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SMARCC1Q92922 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SMARCC1Q92922 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 TOP3BP1-201ENST00000420768 1380 ntBASIC21.76■■□□□ 1.07
SMARCC1Q92922 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 AP001350.2-201ENST00000625104 1094 ntBASIC21.76■■□□□ 1.07
SMARCC1Q92922 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC1Q92922 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SMARCC1Q92922 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 SLC22A20-204ENST00000530038 1673 ntBASIC21.75■■□□□ 1.07
SMARCC1Q92922 AC016027.1-202ENST00000607927 1699 ntBASIC21.75■■□□□ 1.07
SMARCC1Q92922 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.75■■□□□ 1.07
SMARCC1Q92922 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 MEIS3P1-201ENST00000495167 958 ntBASIC21.75■■□□□ 1.07
SMARCC1Q92922 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 AL008721.1-201ENST00000609964 604 ntBASIC21.75■■□□□ 1.07
SMARCC1Q92922 AC018529.1-201ENST00000613063 361 ntBASIC21.75■■□□□ 1.07
SMARCC1Q92922 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC1Q92922 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMARCC1Q92922 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 AC090164.3-201ENST00000610780 2143 ntBASIC21.74■■□□□ 1.07
SMARCC1Q92922 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms