Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 AC084121.4-201ENST00000641598 221 ntBASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 AF228730.8-201ENST00000642140 221 ntBASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 AC008677.1-201ENST00000519230 1561 ntBASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 SPDYE14P-201ENST00000442619 822 ntBASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 AC190387.1-201ENST00000551683 408 ntBASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 AC140878.1-201ENST00000565277 250 ntBASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 WASH6P-202ENST00000359512 1437 ntBASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RAPGEF4Q8WZA2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 SPDYE7P-202ENST00000420373 878 ntBASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAPGEF4Q8WZA2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 FO538757.1-201ENST00000623083 1397 ntBASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF4Q8WZA2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms