Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AC010460.3-201ENST00000511359 1579 ntBASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AC068418.2-201ENST00000577309 3703 ntBASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKAP2Q8WWK9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 ME2P1-201ENST00000426028 1970 ntBASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 UBE2SP1-201ENST00000450587 669 ntBASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 AC126177.1-201ENST00000547829 2218 ntBASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKAP2Q8WWK9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.08■□□□□ 0.33
CKAP2Q8WWK9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 AC097374.2-201ENST00000618617 1306 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 UNC93B2-201ENST00000285383 730 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 MTCL1P1-201ENST00000446207 792 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 RBM17P1-201ENST00000453646 1190 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 IGHV3-52-201ENST00000519770 353 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 FITM1-202ENST00000559294 800 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 AP001412.1-201ENST00000608405 714 ntBASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.08■□□□□ 0.32
CKAP2Q8WWK9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms