Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 AL139327.4-201ENST00000612362 153 ntBASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 PCDHA1-201ENST00000378133 2726 ntBASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 MTCL1P1-201ENST00000446207 792 ntBASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.17■□□□□ 0.02
DNAAF1Q8NEP3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC005521.1-201ENST00000393351 872 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC096633.1-201ENST00000422446 749 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC068472.1-201ENST00000474589 881 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC093525.9-201ENST00000624961 1746 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC078925.2-201ENST00000624013 1973 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms