Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 MTDHP4-201ENST00000600287 670 ntBASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRFBP1Q8NEF9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC004817.3-201ENST00000602957 2129 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AP001094.4-201ENST00000579008 2176 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC009053.2-201ENST00000563701 2365 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 SLC25A1P3-201ENST00000395415 828 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 UNC93B7-201ENST00000509439 705 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC073648.2-201ENST00000510116 352 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 SART3-203ENST00000546611 1184 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 KRT126P-201ENST00000549467 1181 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AL121912.1-201ENST00000603683 238 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AL139384.1-201ENST00000612143 3047 ntBASIC16.4■□□□□ 0.22
SRFBP1Q8NEF9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
SRFBP1Q8NEF9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
SRFBP1Q8NEF9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 AL353135.1-201ENST00000606729 504 ntBASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRFBP1Q8NEF9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms