Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 AL355802.2-201ENST00000402069 882 ntBASIC15.82■□□□□ 0.12
SETD9Q8NE22 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 AC006058.3-201ENST00000606217 1069 ntBASIC15.82■□□□□ 0.12
SETD9Q8NE22 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 HLA-A-202ENST00000376806 1854 ntBASIC15.82■□□□□ 0.12
SETD9Q8NE22 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.82■□□□□ 0.12
SETD9Q8NE22 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SETD9Q8NE22 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 EGFEM1P-202ENST00000431685 1563 ntBASIC15.81■□□□□ 0.12
SETD9Q8NE22 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 RPPH1-201ENST00000516869 333 ntBASIC15.81■□□□□ 0.12
SETD9Q8NE22 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 MTHFR-217ENST00000641820 1569 ntBASIC15.81■□□□□ 0.12
SETD9Q8NE22 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 PAUPAR-201ENST00000630360 2965 ntBASIC15.81■□□□□ 0.12
SETD9Q8NE22 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SETD9Q8NE22 AC092364.2-201ENST00000596710 2692 ntBASIC15.81■□□□□ 0.12
SETD9Q8NE22 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SETD9Q8NE22 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.8■□□□□ 0.12
SETD9Q8NE22 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SETD9Q8NE22 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms