Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 SLC7A15P-201ENST00000424028 1363 ntBASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 MYCLP1-201ENST00000372451 1075 ntBASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 DUTP2-201ENST00000519164 463 ntBASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 AL138918.1-201ENST00000568306 659 ntBASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC168Q8NDH2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 SPDYE19P-201ENST00000338590 713 ntBASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC168Q8NDH2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC234783.1-201ENST00000441761 496 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC027307.2-201ENST00000591252 911 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AL139099.5-201ENST00000635274 300 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms